STRINGSTRING
Solyc04g081360.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081360.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081360.2.1Uncharacterized protein (446 aa)    
Predicted Functional Partners:
Solyc06g053690.1.1
Uncharacterized protein (106 aa)
     
  0.985
Solyc02g086640.2.1
Uncharacterized protein (312 aa)
     
  0.985
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
        0.948
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
        0.948
Solyc08g068310.2.1
Uncharacterized protein (477 aa)
     
 
  0.855
Solyc12g088290.1.1
Uncharacterized protein (820 aa)
     
        0.846
Solyc04g077740.1.1
Uncharacterized protein (360 aa)
     
        0.846
Solyc04g077680.2.1
Uncharacterized protein (809 aa)
     
        0.846
Solyc03g097160.2.1
Uncharacterized protein (871 aa)
     
        0.846
Solyc04g051670.2.1
Uncharacterized protein (1030 aa)
     
        0.844
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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