STRINGSTRING
Solyc04g081820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081820.2.1Uncharacterized protein (559 aa)    
Predicted Functional Partners:
Solyc11g066630.1.1
Uncharacterized protein (145 aa)
     
      0.837
Solyc06g074720.2.1
Uncharacterized protein (219 aa)
     
      0.837
Solyc02g093460.2.1
Uncharacterized protein (539 aa)
     
 
  0.816
Solyc02g081810.2.1
Uncharacterized protein (597 aa)
     
 
  0.816
Solyc03g025270.2.1
Uncharacterized protein (314 aa)
     
 
  0.814
Solyc12g006550.1.1
Uncharacterized protein (329 aa)
     
      0.791
Solyc07g047670.2.1
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
        0.750
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
      0.738
Solyc01g006170.2.1
Uncharacterized protein (288 aa)
     
        0.730
Solyc01g006090.2.1
Uncharacterized protein (282 aa)
     
        0.730
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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