STRINGSTRING
exp11 protein (Solanum lycopersicum) - STRING interaction network
"exp11" - Expansin11 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exp11Expansin11 (257 aa)    
Predicted Functional Partners:
LOC544256
TAGL12 transcription factor (201 aa)
           
  0.691
LOC543847
Ovate protein (278 aa)
           
  0.690
Solyc11g040140.1.1
Xyloglucan endotransglucosylase/hydrolase ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (300 aa)
     
   
  0.517
XTH3
Xyloglucan endotransglucosylase-hydrolase XTH3 ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (287 aa)
           
  0.465
20ox-3
Gibberellin 20-oxidase-3 (379 aa)
           
  0.418
PG2
Polygalacturonase-2 ; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1 (457 aa)
           
  0.410
Solyc09g098270.2.1
Uncharacterized protein (433 aa)
           
  0.410
Solyc04g025440.2.1
Uncharacterized protein (460 aa)
           
  0.410
PS-2
Dehiscence polygalacturonase (392 aa)
           
  0.410
Solyc01g087280.1.1
Uncharacterized protein (425 aa)
           
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (13%) [HD]