STRINGSTRING
Solyc04g081920.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081920.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081920.2.1Uncharacterized protein (431 aa)    
Predicted Functional Partners:
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
   
  0.643
Solyc11g008360.1.1
Uncharacterized protein (414 aa)
 
  0.584
Solyc00g026870.1.1
Annotation not available (465 aa)
 
 
  0.577
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
   
  0.562
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
   
  0.558
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.528
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.524
Solyc09g056260.2.1
tRNA pseudouridine synthase (496 aa)
   
   
  0.518
Solyc07g017260.2.1
Uncharacterized protein (232 aa)
   
   
  0.518
Solyc07g017250.2.1
Uncharacterized protein (196 aa)
   
   
  0.518
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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