STRINGSTRING
Solyc04g082300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g082300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g082300.2.1Uncharacterized protein (350 aa)    
Predicted Functional Partners:
Solyc07g040790.2.1
Uncharacterized protein (435 aa)
     
 
  0.751
Solyc06g009650.2.1
Uncharacterized protein (778 aa)
     
 
  0.746
Solyc01g079490.2.1
Uncharacterized protein (777 aa)
     
 
  0.746
Solyc02g094090.2.1
Uncharacterized protein (696 aa)
     
 
  0.735
Solyc04g049490.2.1
Uncharacterized protein (824 aa)
       
 
  0.728
Solyc11g066550.1.1
Uncharacterized protein (833 aa)
     
      0.721
Solyc02g069660.2.1
Uncharacterized protein (291 aa)
       
 
  0.612
Solyc02g069650.1.1
Uncharacterized protein (743 aa)
       
 
  0.612
Solyc02g030110.2.1
Uncharacterized protein (762 aa)
       
 
  0.612
Solyc02g030100.2.1
Uncharacterized protein (265 aa)
       
 
  0.612
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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