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STRINGSTRING
101256088 protein (Solanum lycopersicum) - STRING interaction network
"101256088" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256088Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown p /.../ (TAIR-AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species- Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source- NCBI BLink) (327 aa)    
Predicted Functional Partners:
101264233
Hydroxyproline-rich glycoprotein family protein (416 aa)
     
   
  0.571
101254228
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (514 aa)
     
   
  0.571
101246793
ThiF family protein (715 aa)
     
   
  0.553
101255058
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species- Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryo /.../1370 (source- NCBI BLink) (442 aa)
     
   
  0.447
101261139
Chloroplast 30S ribosomal protein S20, putative (184 aa)
     
        0.435
101258293
Uncharacterized protein; Shikimate kinase like 2 (386 aa)
     
        0.434
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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