STRINGSTRING
Solyc04g082310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g082310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g082310.2.1Uncharacterized protein (327 aa)    
Predicted Functional Partners:
Solyc07g064950.2.1
Uncharacterized protein (527 aa)
     
   
  0.537
Solyc12g098710.1.1
Uncharacterized protein (369 aa)
   
          0.496
Solyc06g073290.1.1
Uncharacterized protein (263 aa)
   
          0.466
Solyc12g033000.1.1
Uncharacterized protein (142 aa)
   
          0.420
Solyc03g034190.2.1
Uncharacterized protein (176 aa)
   
        0.413
Solyc04g049390.2.1
Uncharacterized protein (310 aa)
   
          0.411
Solyc08g015620.2.1
Uncharacterized protein (276 aa)
   
          0.409
Solyc12g015680.1.1
Uncharacterized protein (197 aa)
   
        0.408
Solyc08g069030.2.1
Delta-aminolevulinic acid dehydratase (430 aa)
     
   
  0.402
Solyc04g081330.2.1
Uncharacterized protein (210 aa)
   
          0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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