STRINGSTRING
Solyc04g082770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g082770.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g082770.2.1Uncharacterized protein (241 aa)    
Predicted Functional Partners:
Solyc04g074040.2.1
Uncharacterized protein (258 aa)
   
     
  0.530
Solyc01g006940.2.1
Uncharacterized protein (328 aa)
   
     
  0.524
Solyc01g105140.2.1
Uncharacterized protein (254 aa)
   
     
  0.520
Solyc02g068440.2.1
Uncharacterized protein (149 aa)
   
     
  0.518
Solyc09g065080.1.1
Uncharacterized protein (225 aa)
   
          0.503
Solyc06g062740.1.1
Uncharacterized protein (197 aa)
   
     
  0.498
Solyc04g074750.2.1
Uncharacterized protein (278 aa)
   
          0.480
Solyc06g035610.2.1
Uncharacterized protein (144 aa)
   
     
  0.451
Solyc04g005350.2.1
Uncharacterized protein (167 aa)
   
     
  0.429
Solyc01g005820.2.1
Uncharacterized protein (252 aa)
   
          0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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