STRINGSTRING
Solyc04g082890.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g082890.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g082890.2.1Uncharacterized protein (284 aa)    
Predicted Functional Partners:
Solyc10g078290.1.1
Uncharacterized protein (660 aa)
       
 
  0.602
BiP/grp78
Luminal-binding protein ; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER (666 aa)
           
  0.491
Solyc03g082920.2.1
Uncharacterized protein (667 aa)
           
  0.491
Solyc09g007300.1.1
Uncharacterized protein (1055 aa)
           
  0.459
Solyc04g082620.2.1
Uncharacterized protein (900 aa)
           
  0.422
Solyc02g082470.2.1
Uncharacterized protein (891 aa)
           
  0.422
Solyc08g082610.2.1
Uncharacterized protein (328 aa)
     
   
  0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]