STRINGSTRING
Solyc04g083160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g083160.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g083160.1.1Uncharacterized protein (510 aa)    
Predicted Functional Partners:
TPS24
Ent-kaurene synthase (819 aa)
     
 
  0.951
Solyc01g080900.2.1
Uncharacterized protein (497 aa)
   
 
0.930
Solyc10g007860.2.1
Uncharacterized protein (481 aa)
   
   
0.928
Solyc12g006460.1.1
Uncharacterized protein (487 aa)
   
   
0.927
Solyc08g005720.2.1
Uncharacterized protein (756 aa)
         
    0.900
TPS21
Terpene synthase (667 aa)
         
    0.900
Solyc06g051750.2.1
CYP90A1-like protein (487 aa)
   
     
  0.718
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.661
Solyc10g080840.1.1
Uncharacterized protein (509 aa)
   
     
  0.661
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.661
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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