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Solyc05g005060.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g005060.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g005060.2.1annotation not available (329 aa)    
Predicted Functional Partners:
AO
Uncharacterized protein; Ascorbate oxidase ; Belongs to the multicopper oxidase family (578 aa)
       
 
  0.633
Solyc04g054660.1.1
annotation not available (184 aa)
       
 
  0.633
101244077
Pectin lyase-like superfamily protein (471 aa)
           
  0.600
101261316
Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family (490 aa)
           
  0.600
101260062
annotation not available (302 aa)
           
  0.594
101258916
annotation not available (573 aa)
       
 
  0.553
101253411
annotation not available (572 aa)
       
 
  0.553
101244777
annotation not available (522 aa)
           
  0.552
101260521
annotation not available (519 aa)
           
  0.552
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.489
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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