STRINGSTRING
Solyc05g005620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g005620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g005620.2.1Uncharacterized protein (958 aa)    
Predicted Functional Partners:
Solyc09g098390.2.1
Uncharacterized protein (355 aa)
     
 
  0.969
Solyc02g085420.2.1
Uncharacterized protein (478 aa)
     
 
  0.969
Solyc11g005110.1.1
Uncharacterized protein (523 aa)
     
 
  0.966
Solyc11g044340.1.1
Uncharacterized protein (784 aa)
     
 
  0.965
Solyc07g022760.2.1
Uncharacterized protein (1023 aa)
     
 
  0.965
Solyc02g071230.1.1
Uncharacterized protein (621 aa)
     
 
  0.957
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
       
 
  0.955
Solyc05g056280.2.1
Uncharacterized protein (400 aa)
     
 
  0.952
Solyc03g093160.2.1
Uncharacterized protein (355 aa)
     
 
  0.952
Solyc09g064590.2.1
Uncharacterized protein (859 aa)
     
 
  0.948
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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