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Solyc05g005640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g005640.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g005640.2.1Uncharacterized protein; methyl-CPG-binding domain 9 (2002 aa)    
Predicted Functional Partners:
Solyc07g054200.2.1
Uncharacterized protein; pre-mRNA splicing factor-related (753 aa)
           
  0.798
Solyc04g078690.2.1
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (314 aa)
           
  0.629
101260654
Myb domain protein 15 (255 aa)
           
  0.481
101258290
Uncharacterized protein; Enhancer of polycomb-like transcription factor protein (1719 aa)
     
   
  0.455
101252617
Zinc knuckle (CCHC-type) family protein (682 aa)
           
  0.449
Solyc08g074370.2.1
Uncharacterized protein; DDB1-CUL4 associated factor 1 (1881 aa)
           
  0.449
101243636
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (718 aa)
           
  0.449
101266919
Uncharacterized protein; Aldehyde dehydrogenase 22A1; Belongs to the aldehyde dehydrogenase family (593 aa)
           
  0.412
101250000
Uncharacterized protein; Farnesylcysteine lyase (492 aa)
           
  0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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