STRINGSTRING
Solyc05g006120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g006120.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g006120.2.1Uncharacterized protein (536 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
  0.970
Solyc02g091120.2.1
DNA ligase (1473 aa)
   
  0.926
Solyc08g082700.2.1
Uncharacterized protein (267 aa)
       
      0.901
Solyc07g017400.2.1
Uncharacterized protein (321 aa)
       
      0.901
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
       
      0.901
Solyc09g090720.2.1
Uncharacterized protein (386 aa)
       
      0.899
Solyc06g067990.2.1
Uncharacterized protein (419 aa)
       
      0.899
Solyc06g063140.2.1
Uncharacterized protein (429 aa)
       
      0.899
Solyc05g053140.2.1
Uncharacterized protein (386 aa)
       
      0.899
Solyc04g079200.2.1
Uncharacterized protein (312 aa)
       
      0.899
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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