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STRINGSTRING
Solyc05g006760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g006760.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g006760.2.1annotation not available (468 aa)    
Predicted Functional Partners:
101255711
annotation not available (326 aa)
       
      0.857
101261789
annotation not available (257 aa)
       
      0.585
101243765
alpha/beta-Hydrolases superfamily protein (256 aa)
       
      0.585
101251737
annotation not available (254 aa)
       
      0.585
101264846
annotation not available (255 aa)
       
      0.585
101266950
annotation not available (256 aa)
       
      0.585
101263517
annotation not available (443 aa)
           
  0.565
101248498
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- ubiquinone biosynthetic process; LOCATED IN- mitochondrion; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- COQ9 (InterPro-IPR013718), Ubiquino /.../synthesis protein COQ9 (InterPro-IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (309 aa)
           
  0.558
101264269
Unknown protein; Has 84 Blast hits to 64 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink) (1130 aa)
           
  0.441
101260134
annotation not available (347 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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