STRINGSTRING
LLP protein (Solanum lycopersicum) - STRING interaction network
"LLP" - LOV/LOV protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLPLOV/LOV protein (398 aa)    
Predicted Functional Partners:
Solyc10g079600.1.1
Uncharacterized protein (227 aa)
     
 
  0.851
Solyc02g071220.2.1
Uncharacterized protein (166 aa)
     
 
  0.851
spy
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY ; Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O- linked sugars to yet unknown proteins (By similarity) (931 aa)
     
   
  0.702
dem
Dem protein (644 aa)
           
  0.691
Solyc09g063030.2.1
Uncharacterized protein (1426 aa)
       
      0.576
Solyc06g008040.2.1
Uncharacterized protein (1436 aa)
       
      0.576
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.493
phyA
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1123 aa)
   
   
  0.457
PHYB1
Phytochrome B1 ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduc [...] (1131 aa)
   
   
  0.457
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
           
  0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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