STRINGSTRING
Solyc05g007150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g007150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g007150.2.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
Solyc07g043560.2.1
Uncharacterized protein (890 aa)
   
 
  0.516
Solyc11g008610.1.1
Uncharacterized protein (393 aa)
     
   
  0.469
Solyc11g008590.1.1
Uncharacterized protein (321 aa)
     
   
  0.469
Solyc09g098520.2.1
Uncharacterized protein (405 aa)
     
   
  0.469
Solyc05g051590.2.1
Uncharacterized protein (330 aa)
     
   
  0.469
Solyc01g095540.2.1
Uncharacterized protein (330 aa)
     
   
  0.469
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
     
 
  0.453
Solyc12g098870.1.1
Uncharacterized protein (1312 aa)
       
 
  0.451
Solyc12g098840.1.1
Uncharacterized protein (1280 aa)
       
 
  0.451
Solyc12g070280.1.1
Uncharacterized protein (231 aa)
       
 
  0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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