STRINGSTRING
Solyc05g007450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g007450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g007450.2.1Uncharacterized protein (284 aa)    
Predicted Functional Partners:
Solyc12g013880.1.1
Uncharacterized protein (662 aa)
     
  0.995
Solyc01g094760.2.1
Uncharacterized protein (539 aa)
     
  0.994
Solyc05g008540.2.1
Origin recognition complex subunit 4 ; Component of the origin recognition complex (ORC) that binds origins of replication (419 aa)
     
  0.992
Solyc06g073510.2.1
Uncharacterized protein (363 aa)
     
  0.989
Solyc00g023270.1.1
Annotation not available (179 aa)
     
  0.989
Solyc03g006420.2.1
Uncharacterized protein (831 aa)
     
  0.985
Solyc06g076860.2.1
Uncharacterized protein (532 aa)
     
  0.980
Solyc09g059440.1.1
Uncharacterized protein (595 aa)
     
  0.980
Solyc07g005020.2.1
DNA helicase (737 aa)
     
  0.978
Solyc08g077990.2.1
Uncharacterized protein (1016 aa)
     
  0.977
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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