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STRINGSTRING
Solyc05g007640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g007640.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g007640.2.1annotation not available (1192 aa)    
Predicted Functional Partners:
Solyc07g052790.1.1
annotation not available (889 aa)
           
  0.806
101267623
annotation not available (275 aa)
           
  0.734
101253151
annotation not available (308 aa)
           
  0.734
101264783
annotation not available (317 aa)
           
  0.734
101260188
annotation not available (525 aa)
           
  0.733
101253945
annotation not available (250 aa)
           
  0.733
101254948
annotation not available (238 aa)
           
  0.733
101055527
Hop-interacting protein THI080 (538 aa)
           
  0.539
101260391
annotation not available (570 aa)
           
  0.539
101258252
annotation not available (228 aa)
           
  0.537
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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