STRINGSTRING
Solyc05g007670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g007670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g007670.2.1Uncharacterized protein (542 aa)    
Predicted Functional Partners:
Solyc12g096560.1.1
Uncharacterized protein (472 aa)
       
0.955
Solyc09g092400.1.1
Uncharacterized protein (451 aa)
       
0.955
Solyc08g016010.2.1
Uncharacterized protein (480 aa)
       
0.954
Solyc12g098540.1.1
Uncharacterized protein (454 aa)
       
0.954
Solyc02g081980.2.1
Uncharacterized protein (434 aa)
       
0.954
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
     
 
    0.911
Solyc01g109830.2.1
Bifunctional dihydrofolate reductase-thymidylate synthase ; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
     
 
  0.909
Solyc03g098250.2.1
DNA polymerase II subunit 2 ; Participates in DNA repair and in chromosomal DNA replication (529 aa)
     
 
    0.903
Solyc12g010380.1.1
Uncharacterized protein (606 aa)
         
  0.903
Solyc09g007180.2.1
Uncharacterized protein (281 aa)
         
  0.903
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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