STRINGSTRING
Solyc05g008180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g008180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g008180.2.1Uncharacterized protein (353 aa)    
Predicted Functional Partners:
Solyc12g014530.1.1
L-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (605 aa)
     
  0.966
Solyc03g044430.2.1
Uncharacterized protein (566 aa)
   
  0.955
Solyc02g093290.2.1
Uncharacterized protein (558 aa)
   
  0.955
Solyc07g065590.2.1
Nicotinate-nucleotide adenylyltransferase (251 aa)
       
  0.950
Solyc06g075080.2.1
Uncharacterized protein (458 aa)
     
 
  0.903
Solyc03g112060.2.1
Uncharacterized protein (741 aa)
         
  0.901
Solyc11g006420.1.1
Uncharacterized protein (345 aa)
         
    0.900
Solyc09g075990.2.1
Uncharacterized protein (289 aa)
         
    0.900
Solyc06g062750.2.1
Uncharacterized protein (370 aa)
         
    0.900
Solyc06g054250.2.1
Uncharacterized protein (301 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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