• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101259631 protein (Solanum lycopersicum) - STRING interaction network
"101259631" - ABC-2 type transporter family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259631ABC-2 type transporter family protein (710 aa)    
Predicted Functional Partners:
Solyc09g098380.1.1
Uncharacterized protein; Transmembrane amino acid transporter family protein (442 aa)
     
   
  0.692
101261601
Uncharacterized protein; Transmembrane amino acid transporter family protein (472 aa)
     
   
  0.692
101245405
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (434 aa)
           
  0.690
101246470
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAIN /.../rPro DOMAIN/s- Protein of unknown function DUF3769 (InterPro-IPR022244); BEST Arabidopsis thaliana protein match is- pigment defective 320 (TAIR-AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source- [...] (458 aa)
     
   
  0.620
Solyc01g005030.2.1
Protein kinase superfamily protein (1152 aa)
     
 
  0.579
101267241
annotation not available (438 aa)
     
   
  0.569
101266946
annotation not available (435 aa)
     
   
  0.569
101264123
annotation not available (438 aa)
     
   
  0.569
101267002
Uncharacterized protein; Transmembrane amino acid transporter family protein (525 aa)
     
   
  0.569
Solyc12g070270.1.1
annotation not available (502 aa)
     
 
  0.564
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]