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Solyc05g008540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g008540.2.1" - Origin recognition complex subunit 4 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g008540.2.1Origin recognition complex subunit 4 ; Component of the origin recognition complex (ORC) that binds origins of replication (419 aa)    
Predicted Functional Partners:
Solyc06g076860.2.1
Uncharacterized protein (532 aa)
     
  0.996
Solyc12g013880.1.1
Uncharacterized protein (662 aa)
     
  0.996
Solyc01g094760.2.1
Uncharacterized protein (539 aa)
     
  0.996
Solyc03g006420.2.1
Uncharacterized protein (831 aa)
     
  0.995
Solyc05g007450.2.1
Uncharacterized protein (284 aa)
     
  0.992
Solyc06g073510.2.1
Uncharacterized protein (363 aa)
     
  0.990
Solyc00g023270.1.1
Annotation not available (179 aa)
     
  0.990
Solyc11g040120.1.1
DNA helicase (860 aa)
     
  0.979
Solyc01g105530.2.1
Uncharacterized protein (75 aa)
     
  0.978
Solyc01g105520.2.1
Uncharacterized protein (600 aa)
     
  0.978
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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