STRINGSTRING
Solyc05g008760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g008760.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g008760.2.1Uncharacterized protein (275 aa)    
Predicted Functional Partners:
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
     
 
  0.941
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
     
 
  0.941
Solyc12g035190.1.1
Uncharacterized protein (386 aa)
       
 
  0.585
Solyc06g071550.2.1
Uncharacterized protein (401 aa)
       
 
  0.585
Solyc04g025540.2.1
Uncharacterized protein (583 aa)
       
 
  0.585
Solyc05g008770.2.1
Uncharacterized protein (321 aa)
   
          0.526
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
   
  0.523
Solyc12g017380.1.1
Uncharacterized protein (445 aa)
   
 
  0.520
Solyc10g074850.1.1
Uncharacterized protein (279 aa)
   
 
  0.520
Solyc08g081090.1.1
Uncharacterized protein (516 aa)
   
 
  0.520
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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