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STRINGSTRING
Solyc05g009010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g009010.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g009010.1.1annotation not available (302 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.489
101262383
annotation not available (318 aa)
   
      0.473
Solyc02g064880.1.1
annotation not available (226 aa)
   
      0.470
Solyc08g076490.2.1
annotation not available (377 aa)
   
      0.453
101265156
annotation not available (320 aa)
   
      0.453
101246189
annotation not available (588 aa)
   
 
 
  0.429
101264787
annotation not available (591 aa)
   
 
 
  0.418
Solyc02g064920.1.1
annotation not available (344 aa)
   
      0.417
101266575
annotation not available (574 aa)
   
 
      0.415
101255976
annotation not available (405 aa)
   
      0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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