STRINGSTRING
Solyc05g009220.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g009220.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g009220.2.1Uncharacterized protein (790 aa)    
Predicted Functional Partners:
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
  0.998
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
   
  0.992
Solyc09g090840.2.1
Uncharacterized protein (576 aa)
   
  0.985
Solyc08g015960.2.1
Uncharacterized protein (287 aa)
   
  0.974
Solyc06g048610.2.1
Uncharacterized protein (386 aa)
   
  0.974
Solyc05g056250.2.1
Uncharacterized protein (544 aa)
   
  0.973
GATA
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial ; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (529 aa)
   
  0.970
Solyc06g068320.2.1
Uncharacterized protein (515 aa)
 
  0.968
Solyc03g117330.2.1
Uncharacterized protein (504 aa)
 
  0.968
Solyc01g096870.2.1
Uncharacterized protein (547 aa)
 
  0.968
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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