STRINGSTRING
Solyc05g009570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g009570.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g009570.2.1Uncharacterized protein (167 aa)    
Predicted Functional Partners:
Solyc02g077990.2.1
Uncharacterized protein (305 aa)
     
   
  0.767
Solyc07g062870.2.1
Uncharacterized protein (184 aa)
   
        0.758
Solyc06g051200.2.1
Uncharacterized protein (280 aa)
     
   
  0.728
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
        0.728
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
        0.728
Solyc12g099110.1.1
Uncharacterized protein (416 aa)
   
      0.718
Solyc01g057830.2.1
Uncharacterized protein (412 aa)
   
      0.716
Solyc06g065390.2.1
Uncharacterized protein (212 aa)
     
   
  0.691
Solyc07g061900.2.1
Uncharacterized protein (288 aa)
     
        0.648
Solyc08g082690.2.1
Uncharacterized protein (196 aa)
   
        0.638
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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