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101258952 protein (Solanum lycopersicum) - STRING interaction network
"101258952" - Ribosomal protein PSRP-3/Ycf65 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258952Ribosomal protein PSRP-3/Ycf65 (167 aa)    
Predicted Functional Partners:
101261139
Chloroplast 30S ribosomal protein S20, putative (184 aa)
     
      0.948
101249844
Uncharacterized protein; Translation elongation factor EF1B/ribosomal protein S6 family protein (196 aa)
     
      0.947
101254999
Plastid-specific ribosomal protein 4 (121 aa)
     
      0.945
101245942
Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family (129 aa)
     
      0.928
101246627
Plastid-specific 50S ribosomal protein 6 (111 aa)
     
      0.911
101252938
annotation not available (149 aa)
     
      0.899
101259205
annotation not available (142 aa)
     
      0.899
101252000
Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (155 aa)
     
        0.860
Solyc06g007760.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- thylakoid, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unk /.../unction DUF2488 (InterPro-IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (220 aa)
     
        0.854
101245116
Uncharacterized protein; Heavy metal transport/detoxification superfamily protein (186 aa)
     
        0.853
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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