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STRINGSTRING
101267989 protein (Solanum lycopersicum) - STRING interaction network
"101267989" - Hydroxyproline-rich glycoprotein family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267989Hydroxyproline-rich glycoprotein family protein (991 aa)    
Predicted Functional Partners:
101265689
annotation not available (164 aa)
           
  0.559
101257121
annotation not available (164 aa)
           
  0.559
Solyc08g082290.2.1
annotation not available (200 aa)
           
  0.481
Solyc08g008320.2.1
annotation not available (356 aa)
           
  0.481
101249229
Uncharacterized protein; Cyclophilin 38 (451 aa)
           
  0.474
Solyc11g065390.1.1
annotation not available (478 aa)
           
  0.420
104646356
annotation not available (496 aa)
           
  0.420
Solyc08g082300.2.1
annotation not available (146 aa)
           
  0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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