STRINGSTRING
Solyc05g010160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g010160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g010160.2.1Uncharacterized protein (1020 aa)    
Predicted Functional Partners:
Solyc06g062680.1.1
Uncharacterized protein (531 aa)
     
 
  0.944
Solyc12g008940.1.1
Uncharacterized protein (374 aa)
     
 
  0.943
Solyc08g063000.2.1
Uncharacterized protein (352 aa)
     
 
  0.943
Solyc06g062690.2.1
Uncharacterized protein (349 aa)
     
 
  0.943
Solyc05g018810.2.1
Uncharacterized protein (376 aa)
     
 
  0.943
Solyc03g121700.2.1
Uncharacterized protein (372 aa)
     
 
  0.943
Solyc09g098240.2.1
Uncharacterized protein (1036 aa)
     
 
0.899
Solyc12g006830.1.1
Histone H2A (135 aa)
       
      0.899
Solyc06g084090.2.1
Histone H2A (203 aa)
       
      0.899
Solyc10g084270.1.1
Importin subunit alpha (520 aa)
     
 
  0.869
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (24%) [HD]