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Solyc05g010180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g010180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g010180.2.1Uncharacterized protein (568 aa)    
Predicted Functional Partners:
Solyc01g005940.2.1
Uncharacterized protein (384 aa)
 
 
  0.782
Psy1
Phytoene synthase 1, chloroplastic ; Catalyzes the reaction from prephytoene diphosphate to phytoene (412 aa)
 
 
  0.780
PSY2
Phytoene synthase 2, chloroplastic ; Catalyzes the reaction from prephytoene diphosphate to phytoene (438 aa)
 
 
  0.778
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
 
   
  0.776
zds
Zeta-carotene desaturase, chloroplastic/chromoplastic ; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (588 aa)
 
 
  0.736
pds
Phytoene dehydrogenase, chloroplastic/chromoplastic ; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene (583 aa)
 
 
  0.731
Solyc01g100650.2.1
Uncharacterized protein (1077 aa)
     
   
  0.702
Solyc09g014760.2.1
Uncharacterized protein (408 aa)
 
   
  0.699
Solyc10g079060.1.1
Uncharacterized protein (427 aa)
   
 
  0.681
Solyc10g079040.1.1
Uncharacterized protein (310 aa)
   
 
  0.681
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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