STRINGSTRING
Solyc05g010300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g010300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g010300.2.1Uncharacterized protein (319 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
   
  0.999
Solyc09g010500.2.1
Uncharacterized protein (144 aa)
   
  0.997
Solyc06g083360.2.1
Uncharacterized protein (71 aa)
   
  0.996
Solyc11g069910.1.1
Uncharacterized protein (116 aa)
     
  0.995
Solyc05g053430.2.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
     
  0.995
Solyc10g007650.2.1
Uncharacterized protein (52 aa)
     
  0.995
Solyc11g012150.1.1
Uncharacterized protein (500 aa)
     
  0.994
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
  0.993
RPE1
DNA-directed RNA polymerase V subunit 1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
   
  0.993
Solyc12g037940.1.1
Uncharacterized protein (136 aa)
   
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]