STRINGSTRING
CB5-B protein (Solanum lycopersicum) - STRING interaction network
"CB5-B" - Cytochrome b5 isoform B in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CB5-BCytochrome b5 isoform B (133 aa)    
Predicted Functional Partners:
Solyc10g081440.1.1
NADH-cytochrome b5 reductase (278 aa)
     
  0.750
Solyc05g018520.2.1
NADH-cytochrome b5 reductase (323 aa)
     
  0.750
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
0.656
LOC778264
Green ripe-like 1 (243 aa)
     
      0.585
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.529
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.524
BI-1
Bax inhibitor (249 aa)
     
 
  0.522
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.491
Solyc03g116730.2.1
Uncharacterized protein (387 aa)
     
 
  0.488
Solyc11g042420.1.1
Uncharacterized protein ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
     
 
  0.487
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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