STRINGSTRING
Solyc05g012100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012100.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012100.2.1Uncharacterized protein (645 aa)    
Predicted Functional Partners:
Solyc03g118640.2.1
Uncharacterized protein (1343 aa)
   
 
  0.815
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
   
  0.718
Solyc10g081280.1.1
Uncharacterized protein (239 aa)
   
 
  0.669
LOC543657
Putative thioredoxin ; Probable thiol-disulfide oxidoreductase that may play a role in proper chloroplast development (By similarity). Negatively regulates Cf-9/Avr9-mediated cell death and defense responses (175 aa)
     
 
  0.649
Solyc11g033260.1.1
Uncharacterized protein (341 aa)
   
 
  0.595
Solyc05g006110.2.1
Uncharacterized protein (170 aa)
     
   
  0.556
Solyc02g079100.2.1
Uncharacterized protein (385 aa)
   
 
  0.539
Solyc00g017920.1.1
Annotation not available (356 aa)
       
  0.528
Solyc12g035620.1.1
Uncharacterized protein (57 aa)
       
  0.523
Solyc10g085650.1.1
Uncharacterized protein (575 aa)
       
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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