STRINGSTRING
Solyc05g012130.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012130.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012130.2.1Uncharacterized protein (817 aa)    
Predicted Functional Partners:
Solyc11g012400.1.1
Uncharacterized protein (340 aa)
       
  0.916
Solyc07g065130.2.1
Uncharacterized protein (411 aa)
       
  0.916
Solyc05g054130.2.1
Uncharacterized protein (341 aa)
       
  0.916
Solyc01g080350.2.1
Uncharacterized protein (340 aa)
       
  0.916
Solyc12g096060.1.1
Uncharacterized protein (215 aa)
       
  0.888
Solyc08g075960.2.1
Uncharacterized protein (215 aa)
       
  0.888
Solyc07g041730.2.1
Uncharacterized protein (215 aa)
       
  0.888
Solyc09g066460.2.1
Uncharacterized protein (538 aa)
     
0.864
Solyc09g090200.2.1
Uncharacterized protein (547 aa)
     
0.864
Solyc08g062670.2.1
Uncharacterized protein (520 aa)
     
0.864
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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