STRINGSTRING
Solyc05g012190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012190.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012190.2.1Uncharacterized protein (611 aa)    
Predicted Functional Partners:
Solyc07g048120.2.1
Uncharacterized protein (569 aa)
     
  0.977
Solyc01g110410.2.1
Uncharacterized protein (317 aa)
     
  0.976
Solyc06g084440.2.1
Uncharacterized protein (411 aa)
     
  0.974
Solyc02g080380.2.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
       
  0.971
Solyc07g007380.2.1
Uncharacterized protein (316 aa)
       
  0.956
Solyc07g064590.2.1
Uncharacterized protein (188 aa)
     
  0.951
Solyc01g109350.2.1
Uncharacterized protein (757 aa)
     
 
  0.948
Solyc07g049260.2.1
Uncharacterized protein (396 aa)
     
 
  0.946
Solyc05g042040.2.1
Uncharacterized protein (409 aa)
     
 
  0.946
Solyc02g081140.2.1
Uncharacterized protein (304 aa)
     
 
  0.946
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]