STRINGSTRING
Solyc05g012320.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012320.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012320.1.1Uncharacterized protein (266 aa)    
Predicted Functional Partners:
Solyc04g010080.2.1
Uncharacterized protein (729 aa)
     
   
  0.552
Solyc04g081310.2.1
Uncharacterized protein (272 aa)
     
   
  0.498
Solyc10g081540.1.1
Uncharacterized protein (498 aa)
     
   
  0.474
Solyc06g066300.1.1
Uncharacterized protein (483 aa)
     
   
  0.474
Solyc01g109070.2.1
Uncharacterized protein (81 aa)
           
  0.454
CHRD
Constitutive plastid-lipid associated protein (187 aa)
           
  0.452
CHRDi
Inducible plastid-lipid associated protein (174 aa)
           
  0.452
Solyc08g062920.2.1
Elongation factor 2 (828 aa)
       
  0.449
Solyc08g062910.2.1
Elongation factor 2 (770 aa)
       
  0.449
Solyc01g068070.2.1
Uncharacterized protein (1382 aa)
       
 
  0.449
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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