STRINGSTRING
Solyc05g012340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012340.2.1Uncharacterized protein (361 aa)    
Predicted Functional Partners:
Solyc08g082970.2.1
Uncharacterized protein (465 aa)
       
      0.590
Solyc08g008510.2.1
Uncharacterized protein (460 aa)
       
      0.590
Solyc10g080200.1.1
Stress-associated protein 12 (272 aa)
       
      0.561
Solyc04g015570.2.1
Stress-associated protein 13 (277 aa)
       
      0.561
SAP11
Stress-associated protein 11 (188 aa)
       
      0.561
Solyc02g080380.2.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
       
    0.524
Solyc12g013800.1.1
Uncharacterized protein (282 aa)
       
  0.522
Solyc12g010670.1.1
Uncharacterized protein (224 aa)
       
  0.522
Solyc10g078900.1.1
Uncharacterized protein (409 aa)
       
  0.522
Solyc10g051270.1.1
Uncharacterized protein (256 aa)
       
  0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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