STRINGSTRING
Solyc05g012480.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012480.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012480.2.1Uncharacterized protein (533 aa)    
Predicted Functional Partners:
Solyc00g042130.1.1
Annotation not available (704 aa)
     
 
  0.998
Solyc12g042920.1.1
Uncharacterized protein (324 aa)
     
  0.998
Solyc06g067920.2.1
Uncharacterized protein (320 aa)
     
  0.998
Solyc02g093900.2.1
Uncharacterized protein (269 aa)
     
  0.998
atpB
ATP synthase subunit beta, chloroplastic ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (609 aa)
     
  0.995
Solyc00g042140.1.1
Annotation not available (399 aa)
     
  0.994
Solyc12g005630.1.1
Cytochrome b6-f complex iron-sulfur subunit (231 aa)
     
  0.994
Solyc11g039840.1.1
Cytochrome b-c1 complex subunit Rieske, mitochondrial ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (265 aa)
     
  0.994
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
     
  0.990
Solyc08g067020.2.1
Cytochrome b-c1 complex subunit 7 ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
  0.986
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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