STRINGSTRING
Solyc05g012710.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012710.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g012710.2.1Uncharacterized protein (234 aa)    
Predicted Functional Partners:
Solyc03g007980.1.1
Uncharacterized protein (331 aa)
     
 
  0.868
Solyc01g007880.2.1
Uncharacterized protein (781 aa)
       
 
  0.626
FtsZ1
Plastid-dividing ring protein (419 aa)
     
   
  0.567
Solyc04g081070.2.1
Hop-interacting protein THI044 (819 aa)
     
   
  0.521
Solyc09g091970.2.1
Uncharacterized protein (313 aa)
           
  0.513
Solyc10g083490.1.1
Uncharacterized protein (480 aa)
     
   
  0.497
Solyc09g009430.2.1
Uncharacterized protein (478 aa)
     
   
  0.497
Solyc10g047050.1.1
Uncharacterized protein (771 aa)
     
   
  0.489
Solyc01g100190.2.1
Uncharacterized protein (574 aa)
           
  0.483
Solyc01g109260.2.1
Uncharacterized protein (278 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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