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Solyc05g012940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g012940.2.1" - Uncharacterized protein in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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Cooccurence
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[Homology]
Score
Solyc05g012940.2.1Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- nucleus; CONTAINS InterPro DOMAIN/s- Ribonuclease H2, subunit B (InterPro-IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; /.../ia - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (334 aa)    
Predicted Functional Partners:
101265389
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (297 aa)
     
 
  0.998
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.966
101260061
annotation not available (1097 aa)
     
        0.866
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
   
  0.861
101257469
DNA-binding HORMA family protein (208 aa)
     
        0.783
Solyc02g091120.2.1
DNA LIGASE 6 (1473 aa)
     
   
  0.733
101263837
Uncharacterized protein; Glucan synthase-like 12 (1948 aa)
     
   
  0.706
101267848
annotation not available (969 aa)
           
  0.682
101249782
Uncharacterized protein; Callose synthase 5 (1931 aa)
     
   
  0.664
101246578
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA (229 aa)
     
        0.659
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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