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Solyc05g013030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g013030.1.1" - Proteasome regulatory particle subunit in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g013030.1.1Proteasome regulatory particle subunit (423 aa)    
Predicted Functional Partners:
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
     
  0.999
Solyc01g008370.2.1
Uncharacterized protein (310 aa)
     
  0.997
Solyc10g044990.1.1
Uncharacterized protein (153 aa)
     
  0.997
Solyc01g111710.2.1
Uncharacterized protein (487 aa)
     
  0.997
Solyc01g111700.1.1
Uncharacterized protein (484 aa)
     
  0.997
Solyc09g090720.2.1
Uncharacterized protein (386 aa)
     
  0.996
Solyc05g053140.2.1
Uncharacterized protein (386 aa)
     
  0.996
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
     
  0.996
Solyc08g082700.2.1
Uncharacterized protein (267 aa)
     
  0.995
Solyc02g081700.1.1
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (248 aa)
     
  0.995
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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