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STRINGSTRING
104647326 protein (Solanum lycopersicum) - STRING interaction network
"104647326" - Vesicle transport v-SNARE family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
104647326Vesicle transport v-SNARE family protein (221 aa)    
Predicted Functional Partners:
Solyc12g089150.1.1
Uncharacterized protein; Syntaxin of plants 61 (129 aa)
     
 
  0.993
101259553
annotation not available (199 aa)
     
  0.991
Solyc07g065030.2.1
annotation not available (209 aa)
     
  0.987
Solyc10g081060.1.1
annotation not available (223 aa)
     
  0.985
101264116
Vacuolar protein sorting 45; Belongs to the STXBP/unc-18/SEC1 family (568 aa)
     
 
  0.982
Solyc06g005080.2.1
Uncharacterized protein; Zinc ion binding (1067 aa)
       
 
  0.960
101250423
Uncharacterized protein; Vacuoleless1 (VCL1) (843 aa)
     
 
  0.957
101263154
Uncharacterized protein; Syntaxin of plants 42; Belongs to the syntaxin family (319 aa)
     
 
  0.954
101265370
annotation not available (324 aa)
     
 
  0.954
101250531
Uncharacterized protein; Syntaxin of plants 32; Belongs to the syntaxin family (341 aa)
     
 
  0.948
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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