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STRINGSTRING
Solyc05g013090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g013090.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g013090.1.1annotation not available (111 aa)    
Predicted Functional Partners:
Solyc07g032420.1.1
annotation not available (186 aa)
   
 
  0.928
Solyc01g017740.1.1
annotation not available (97 aa)
   
 
  0.890
Solyc01g056670.1.1
Uncharacterized protein; NADH dehydrogenase subunit 4L (56 aa)
     
 
  0.781
101263481
Uncharacterized protein; NADH-ubiquinone dehydrogenase, mitochondrial, putative; Belongs to the complex I 75 kDa subunit family (739 aa)
   
 
  0.745
101268050
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain (487 aa)
   
 
  0.743
101244117
Uncharacterized protein; NADH-ubiquinone oxidoreductase 24 kDa subunit, putative (255 aa)
   
 
  0.726
101251020
LYR family of Fe/S cluster biogenesis protein (132 aa)
       
      0.623
101245288
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (401 aa)
     
 
  0.614
Solyc02g092270.2.1
Uncharacterized protein; NADH-ubiquinone oxidoreductase-related (76 aa)
     
 
  0.609
101267099
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (157 aa)
     
 
  0.602
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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