STRINGSTRING
Solyc05g013160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g013160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g013160.2.1Uncharacterized protein (488 aa)    
Predicted Functional Partners:
Solyc04g007850.2.1
Protein BCCIP homolog (298 aa)
     
 
  0.577
Solyc06g036670.1.1
Uncharacterized protein (223 aa)
       
 
  0.473
Solyc09g060000.1.1
Uncharacterized protein (263 aa)
     
   
  0.429
Solyc07g017920.1.1
Uncharacterized protein (185 aa)
     
   
  0.429
Solyc07g008580.1.1
Uncharacterized protein (278 aa)
     
   
  0.429
Solyc07g008500.1.1
Uncharacterized protein (288 aa)
     
   
  0.429
Solyc07g008460.2.1
Uncharacterized protein (452 aa)
     
   
  0.429
Solyc06g059960.2.1
Uncharacterized protein (1665 aa)
     
   
  0.429
Solyc04g057880.2.1
Uncharacterized protein (1396 aa)
     
   
  0.429
Solyc04g024600.1.1
Uncharacterized protein (141 aa)
     
   
  0.429
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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