STRINGSTRING
Solyc05g013790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g013790.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g013790.2.1Uncharacterized protein (577 aa)    
Predicted Functional Partners:
Solyc10g085790.1.1
Uncharacterized protein (508 aa)
     
 
  0.971
Solyc04g082790.2.1
Uncharacterized protein (499 aa)
     
 
  0.971
Solyc12g049410.1.1
Uncharacterized protein (1016 aa)
     
 
  0.952
Solyc10g047000.1.1
Uncharacterized protein (350 aa)
     
 
  0.944
Solyc08g082100.2.1
Uncharacterized protein (325 aa)
     
 
  0.937
Solyc12g009390.1.1
Uncharacterized protein (429 aa)
       
 
  0.916
Solyc12g035670.1.1
Uncharacterized protein (1565 aa)
     
 
  0.906
Solyc06g061120.2.1
Uncharacterized protein (417 aa)
     
 
  0.906
Solyc09g005010.2.1
Uncharacterized protein (1001 aa)
       
 
  0.871
Solyc06g052030.2.1
Uncharacterized protein (783 aa)
       
 
  0.871
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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