STRINGSTRING
Solyc05g013910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g013910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g013910.2.1Uncharacterized protein (63 aa)    
Predicted Functional Partners:
Solyc03g025910.2.1
Uncharacterized protein (81 aa)
     
   
  0.542
Solyc04g009570.2.1
Uncharacterized protein (72 aa)
           
  0.459
Solyc02g094250.2.1
Uncharacterized protein (72 aa)
           
  0.459
Solyc12g036790.1.1
Uncharacterized protein (121 aa)
     
   
  0.419
Solyc10g005230.2.1
Uncharacterized protein (81 aa)
     
   
  0.418
Solyc08g080240.2.1
Uncharacterized protein (105 aa)
     
   
  0.412
Solyc02g085540.1.1
Uncharacterized protein (110 aa)
     
   
  0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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