STRINGSTRING
Solyc05g014150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g014150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g014150.2.1Uncharacterized protein (210 aa)    
Predicted Functional Partners:
Solyc11g073130.1.1
Uncharacterized protein (215 aa)
     
  0.912
Solyc04g014370.2.1
Uncharacterized protein (221 aa)
     
  0.912
Solyc08g067260.2.1
Uncharacterized protein (506 aa)
         
  0.900
Solyc10g009240.2.1
3-ketoacyl-CoA synthase (529 aa)
         
  0.900
Solyc09g083050.2.1
3-ketoacyl-CoA synthase (513 aa)
         
  0.900
Solyc08g067410.1.1
3-ketoacyl-CoA synthase (505 aa)
         
  0.900
Solyc06g065560.1.1
3-ketoacyl-CoA synthase (513 aa)
         
  0.900
Solyc05g009280.2.1
3-ketoacyl-CoA synthase (519 aa)
         
  0.900
Solyc04g080450.1.1
3-ketoacyl-CoA synthase (517 aa)
         
  0.900
Solyc03g005320.2.1
3-ketoacyl-CoA synthase (519 aa)
         
  0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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