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Solyc05g014190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g014190.2.1" - CAAX amino terminal protease family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g014190.2.1CAAX amino terminal protease family protein (209 aa)    
Predicted Functional Partners:
101249793
Peptidase family M48 family protein (314 aa)
   
   
  0.958
101244701
Zincin-like metalloproteases family protein (693 aa)
   
 
  0.858
101248296
Unknown protein; Has 54 Blast hits to 54 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink) (202 aa)
       
      0.840
101255703
annotation not available (409 aa)
       
      0.766
101254537
annotation not available (774 aa)
           
  0.740
101256508
Uncharacterized protein; GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative (536 aa)
     
   
  0.721
Solyc11g068750.1.1
annotation not available (452 aa)
       
      0.663
101243998
annotation not available (255 aa)
   
   
  0.661
101258948
Uncharacterized protein; No pollen germination related 1 (706 aa)
           
  0.618
101246880
Uncharacterized protein; Embryo sac development arrest 7 (701 aa)
           
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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