STRINGSTRING
Solyc05g014190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g014190.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g014190.2.1Uncharacterized protein (209 aa)    
Predicted Functional Partners:
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
   
        0.529
Solyc01g104320.2.1
Uncharacterized protein (284 aa)
   
        0.525
Solyc01g097820.2.1
Uncharacterized protein (250 aa)
   
        0.524
Solyc03g006540.2.1
Uncharacterized protein (180 aa)
   
          0.522
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
          0.518
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
          0.516
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
        0.515
Solyc12g096100.1.1
Uncharacterized protein (193 aa)
   
          0.515
Solyc02g063170.2.1
Uncharacterized protein (246 aa)
   
          0.515
Solyc11g044530.1.1
Uncharacterized protein (234 aa)
   
        0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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