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STRINGSTRING
Solyc05g014810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g014810.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g014810.1.1annotation not available (151 aa)    
Predicted Functional Partners:
101257133
annotation not available (447 aa)
       
 
  0.829
FIE
Fertilization-independent endosperm protein (372 aa)
       
 
  0.753
101251929
Uncharacterized protein; Haloacid dehalogenase-like hydrolase family protein (1077 aa)
     
 
  0.742
101255013
Protein arginine N-methyltransferase; SHK1 binding protein 1; Belongs to the class I-like SAM-binding methyltransferase superfamily (655 aa)
       
 
  0.701
101256745
annotation not available (455 aa)
       
 
  0.698
101264735
annotation not available (455 aa)
       
 
  0.698
101262595
annotation not available (469 aa)
     
 
  0.695
101263022
annotation not available (193 aa)
     
 
  0.695
101264476
annotation not available (193 aa)
     
 
  0.695
101254449
annotation not available (181 aa)
     
 
  0.695
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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