STRINGSTRING
Solyc05g015220.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g015220.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g015220.2.1Uncharacterized protein (749 aa)    
Predicted Functional Partners:
Solyc06g068700.2.1
Uncharacterized protein (532 aa)
     
 
  0.805
CNX61.0
Calnexin-like protein (538 aa)
     
 
  0.805
Solyc00g036760.1.1
Annotation not available (321 aa)
     
      0.650
Solyc01g098230.2.1
Uncharacterized protein (498 aa)
     
      0.606
Solyc12g008360.1.1
Uncharacterized protein (772 aa)
     
   
  0.571
Solyc09g010770.2.1
Uncharacterized protein (490 aa)
     
   
  0.520
Solyc08g075530.2.1
Uncharacterized protein (1069 aa)
     
 
  0.519
gluII
Alpha glucosidase II (921 aa)
     
 
  0.519
Solyc03g094020.2.1
Uncharacterized protein (849 aa)
     
 
  0.519
Solyc03g005800.2.1
Uncharacterized protein (223 aa)
       
      0.512
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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