STRINGSTRING
Solyc05g015370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g015370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g015370.2.1Uncharacterized protein (221 aa)    
Predicted Functional Partners:
Solyc12g008680.1.1
Uncharacterized protein (242 aa)
       
 
  0.882
Solyc09g082790.2.1
Uncharacterized protein (334 aa)
       
 
  0.778
Solyc05g050960.2.1
Uncharacterized protein (213 aa)
       
 
  0.778
Solyc05g050950.2.1
Uncharacterized protein (123 aa)
       
 
  0.778
Solyc01g079080.2.1
Uncharacterized protein (782 aa)
       
 
  0.616
Solyc11g008740.1.1
Uncharacterized protein (1278 aa)
       
 
  0.523
Solyc06g074870.1.1
Uncharacterized protein (402 aa)
       
 
  0.523
Solyc06g074860.1.1
Uncharacterized protein (171 aa)
       
 
  0.523
Solyc02g093930.2.1
Uncharacterized protein (700 aa)
       
 
  0.523
Solyc02g086540.1.1
Uncharacterized protein (476 aa)
       
 
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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